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Methodology

Ontology engineering, done the rigorous way — at AI speed

We combine decades-proven ontology methods with LLM-assisted acceleration. Machines draft; experts decide; tests prove it.

Foundations

Built on methods that have outlasted every hype cycle

Our process synthesises the best-established ontology engineering methods and adapts them to AI delivery timelines.

The Toronto Virtual Enterprise (TOVE) work introduced competency questions — the questions an ontology must be able to answer — as the way to define its scope and judge its completeness (EIL, University of Toronto). METHONTOLOGY contributed a full development lifecycle, and the scenario-based NeOn methodology put reuse and collaborative, networked ontologies at the centre. Test-driven ontology development closes the loop: questions become executable tests.

TOVE

Motivating scenarios → competency questions → formal terms and axioms.

METHONTOLOGY

Specification, conceptualisation, formalisation, implementation, maintenance.

NeOn

Nine scenarios centred on reusing and re-engineering existing resources.

Test-driven

Every competency question becomes a SPARQL or SHACL test in CI.

Lifecycle

Six phases. Clear outputs at each.

Iterative, not waterfall: we cycle through phases per module, so value lands in weeks, not quarters.

Specify

Agree purpose, scope, users, AI use cases and — just as important — what the AI must never see.

OUTPUTSOntology requirements spec · CQ catalogue · exclusion list

Acquire & reuse

Mine schemas, glossaries, documents and SME knowledge; select standards and existing ontologies to import.

OUTPUTSTerm inventory · reuse plan · source map

Conceptualise

Draft classes, relationships and constraints; review visually with domain experts in short loops.

OUTPUTSConcept model · diagrams · decision log

Formalise & validate

Encode in OWL 2 and SHACL; run reasoners; execute competency-question tests on sample data.

OUTPUTSOntology modules · shapes · passing test suite

Integrate & govern

Map sources, build the graph, attach sensitivity and purpose policies, wire into retrieval and agents.

OUTPUTSMappings · policy model · semantic APIs

Evaluate & evolve

Measure answer quality, leakage and cost against a baseline; version and release through OntologyOps.

OUTPUTSEvaluation report · release · roadmap
Competency questions

Questions first. Classes second.

Vague questions produce vague ontologies. We use a typed catalogue of competency questions so each one has a job: scoping, validating, or testing a design decision.

The typology follows recent research by Keet and Khan, which distinguishes scoping, validating, foundational, relationship and metaproperty questions and maps where each helps in the NeOn process (arXiv 2412.13688). For AI work we add one more family: guardrail questions — "which facts must this agent never receive?"

SCOPING
What must this ontology cover?
“Which parties can be involved in a claim?”
VALIDATING
Does the model give the right answer?
“Which coverages apply to loss event LE-77?”
FOUNDATIONAL
Which upper-level commitments hold?
“Is a Claim an event, a document or a role?”
RELATIONSHIP
How do concepts connect?
“Can a Policy have more than one PolicyHolder?”
METAPROPERTY
What kind of property is it?
“Is 'sensitivity' transitive through derivation?”
GUARDRAIL
What must never flow?
“Which facts about a claimant may a vendor-facing agent never receive?”
Reuse first

Don't model what the world already agreed on

Reusing open standards cuts build time, improves interoperability with partners and regulators, and gives you an exit strategy from any vendor — including us.

Financial services

FIBO, LEI, ISO 20022 concepts

Insurance

ACORD data model concepts, FIBO parties

Healthcare

HL7 FHIR, SNOMED CT, LOINC, RxNorm

Manufacturing

ISA-95, Asset Administration Shell

Security

STIX 2.1, MITRE ATT&CK, D3FEND, UCO

Privacy & policy

W3C DPV, ODRL, PROV-O

Cross-domain

schema.org, SKOS, OWL-Time, GeoSPARQL

Upper level

BFO or gUFO where rigour pays off

Human + LLM

AI accelerates the build. Experts own the meaning.

What the models do

  • Extract candidate terms and relations from schemas, PDFs and tickets
  • Propose definitions, synonyms and alignments to standards
  • Draft competency questions from user stories
  • Generate test data and SPARQL for CQ tests
  • Flag likely sensitive properties for review

What the experts decide

  • Which concepts exist and what they mean
  • Modelling patterns and upper-level commitments
  • Sensitivity classification and purpose rules
  • Acceptance of every alignment and axiom
  • Release, deprecation and change policy
Principles

How we make design decisions

Questions before classes

If no competency question needs it, it doesn't go in.

Small core, modular edges

A narrow, high-confidence core extended iteratively beats a grand unified model.

Policies are data

Access rules live in the ontology, versioned and tested like everything else.

Evidence or it didn't happen

Every fact keeps its provenance; every answer shows its path.

Open standards, no lock-in

OWL, SHACL, SPARQL and PROV run on any compliant store.

Your team owns it

Pairing from day one; documentation and training are deliverables, not extras.